PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.90MNJ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 413aa    MW: 45137.5 Da    PI: 8.8789
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.90MNJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14.1e-13183227347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar   + Rt+ q+ s+ qky
      Aradu.90MNJ 183 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVTSRTPTQVASHAQKY 227
                      8*******************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501588.51584101IPR001878Zinc finger, CCHC-type
PROSITE profilePS5129419.369176232IPR017930Myb domain
SuperFamilySSF466894.02E-17178233IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-19179231IPR006447Myb domain, plants
SMARTSM007171.1E-10180230IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.6E-11182226IPR009057Homeodomain-like
CDDcd001672.48E-9183228No hitNo description
PfamPF002491.4E-10183227IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000122Biological Processnegative regulation of transcription from RNA polymerase II promoter
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0030307Biological Processpositive regulation of cell growth
GO:0046686Biological Processresponse to cadmium ion
GO:0048366Biological Processleaf development
GO:2000469Biological Processnegative regulation of peroxidase activity
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MAMKTCTKHS IISLFYLRDE DKYAKLQFCA SSFTPISASR GRKNKNPFLN RVNSFGSQLT  60
RFQNPPLIAT VSFHFAALEG NMTRRCSHCS NNGHNSRTCP NRGVKLFGVR LTDGSIRKSA  120
SMGNLTHYAA SGSSSGSHHH ASNNPGSPGG GDTPDHAAAE GYASEDFVPG SSSTSRERKR  180
GVPWTEEEHR MFLLGLQKLG KGDWRGIARN YVTSRTPTQV ASHAQKYFIR QSNVSRRKRR  240
SSLFDIVADE SADTPMVQQD QLQIETEGNN PLPPVPPALD EECESMDSAN SNDRELALLK  300
SDNSRSPFPV LYPTFYPPVF QLPIPCWSGY DPEPTKKKEA HEVLKPTAVH SKSPINVDEL  360
VGMSKLSLGD SIGDSAPSSL SLKLLEGPSR QSAFHATPAC DSSNMNGSAI HAL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00551DAPTransfer from AT5G47390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF2086760.0KF208676.1 Arachis hypogaea putative MYB-related protein 22 (MYB22) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963619.10.0PREDICTED: transcription factor MYB1R1-like
TrEMBLV5T7140.0V5T714_ARAHY; Putative MYB-related protein 22
STRINGGLYMA17G15330.11e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72303145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-136MYB_related family protein